PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000240094
Common NameLOC103421355, NAC10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 204aa    MW: 23300.8 Da    PI: 4.7147
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000240094genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM118.94.9e-3781311128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                    lppGfrF+Ptdeelvv++L++k++  +++  +vi+++++y ++Pw+L+ k+ +e k+wyf+s+r+        +nr+t++gyWk+ g +++++s+ 
  MDP0000240094   8 LPPGFRFDPTDEELVVHFLQRKAALLPFHP-DVIPDLHLYPYDPWELNGKALSEGKQWYFYSRRA--------QNRVTNNGYWKTLGIEEPIFSSs 94 
                    79*************************999.99**************97777889*******985........589******************96 PP

            NAM  96 ...kgelvglkktLvfykgrap.kgektdWvmheyrl 128
                        +++vg+kk L+f+ g+ap +g kt+W+mheyrl
  MDP0000240094  95 ssnPTKKVGMKKYLTFFVGEAPnSGIKTNWTMHEYRL 131
                    6655566**********997762589*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-455170IPR003441NAC domain
PROSITE profilePS5100544.6238172IPR003441NAC domain
PfamPF023652.2E-239131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010089Biological Processxylem development
GO:0043067Biological Processregulation of programmed cell death
GO:0048367Biological Processshoot system development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MGDDQFKLPP GFRFDPTDEE LVVHFLQRKA ALLPFHPDVI PDLHLYPYDP WELNGKALSE  60
GKQWYFYSRR AQNRVTNNGY WKTLGIEEPI FSSSSSNPTK KVGMKKYLTF FVGEAPNSGI  120
KTNWTMHEYR LSSSASDCAS SSTTTTTSRS SKRRGQSNTE YSGYVLCKVY EREDDDDDGT  180
ELSCLDEVFL SLDDLDEISL PNYN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swp_D1e-37517317169NAC domain-containing protein 19
3swp_C1e-37517317169NAC domain-containing protein 19
3swp_B1e-37517317169NAC domain-containing protein 19
3swp_A1e-37517317169NAC domain-containing protein 19
3swm_D1e-37517317169NAC domain-containing protein 19
3swm_C1e-37517317169NAC domain-containing protein 19
3swm_B1e-37517317169NAC domain-containing protein 19
3swm_A1e-37517317169NAC domain-containing protein 19
4dul_B1e-37517314166NAC domain-containing protein 19
4dul_A1e-37517314166NAC domain-containing protein 19
1ut7_B1e-37517314166NO APICAL MERISTEM PROTEIN
1ut7_A1e-37517314166NO APICAL MERISTEM PROTEIN
1ut4_B1e-37517314166NO APICAL MERISTEM PROTEIN
1ut4_A1e-37517314166NO APICAL MERISTEM PROTEIN
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.153120.0fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008357604.11e-152PREDICTED: NAC transcription factor ONAC010-like isoform X2
SwissprotQ8GWK66e-79NC104_ARATH; NAC domain-containing protein 104
TrEMBLD9ZJ881e-152D9ZJ88_MALDO; NAC domain class transcription factor
STRINGGLYMA08G19300.17e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17363395
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-77xylem NAC domain 1